J.D. Stanton Series by Alton Gansky

J. D. Stanton investigates the mysterious appearance of a sunken submarine that has returned fifty years after it was presumed lost in the Atlantic.

What sinister secret lies hidden in the town of Roanoke II? How did the entire population of this desert military instillation simply disappear? High-level Pentagon orders call J. D. Stanton, retired navy captain, back to active duty to investigate. Heading a crack team of military, government, and scientific experts, Stanton faces a bewildering scenario. Food still on dinner plates, gas nozzles still in the fuel ports of cars at the filling station . . moreWhat sinister secret lies hidden in the town of Roanoke II? How did the entire population of this desert military instillation simply disappear? High-level Pentagon orders call J. D. Stanton, retired navy captain, back to active duty to investigate. Heading a crack team of military, government, and scientific experts, Stanton faces a bewildering scenario. Food still on dinner plates, gas nozzles still in the fuel ports of cars at the filling station . . . Whatever happened took the people of Roanoke II completely by surprise. But took them where? The answer -- far beyond what Stanton could conceive in his wildest dreams -- carries a steep price. For forces higher than the Pentagon are invested in the top-secret research of Roanoke II. And they'll protect it ruthlessly. Caught with his team between trained paramilitary killers and an unearthly and deadly enigma, Stanton faces a choice that will stretch his Christian faith to the limits. It could supply answers to the mystery of Roanoke II . . . Or unfathomable and irrevocable horrors. less

J. D. Stanton and crew end up on a ship 'out of time' with someone who wants to murder them.